Publications

Books

Book Chapters: 1

2019

- Sergio Santander-Jiménez and Miguel A. Vega-Rodríguez and Leonel Sousa, Analysis of MOEA/D Approaches for Inferring Ancestral Relationships, chapter of Hybrid Artificial Intelligence Systems. LNAI Vol. 11734, Jun. 2019, Springer [bibTex]

Articles

International Journal Articles: 36

2019

- José M. Granado-Criado and Sergio Santander-Jiménez and Miguel A. Vega-Rodríguez and Álvaro Rubio-Largo, A Multi-Objective Optimization Procedure for Solving the High-Order Epistasis Detection Problem, article in Expert Systems With Applications vol. 142 pp. 1-15, to appear on 2019, Pergamon-Elsevier Science [DOI Article link] [bibTex]
- Fereshteh Jafarzadehpour and Amir Molahosseini and Azadeh Zarandi and Leonel Sousa, A New Energy-Efficient Hybrid Wide-Operand Adder Architecture, article in IET Circuits, Devices & Systems, to appear on 2019 [bibTex]
- João Francisco Cardoso Gante and Gabriel Falcão and Leonel Sousa, Deep Learning Architectures for Accurate Millimeter Wave Positioning in 5G, article in Neural Processing Letters, to appear on 2019, Kluwer Academic Publishers [bibTex] [PDF]
- Fereshteh Jafarzadehpour and Amir Molahosseini and Azadeh Zarandi and Leonel Sousa, Efficient Modular Adder Designs Based on Thermometer and One-Hot Coding, article in IEEE Transactions on Very Large Scale Integration Systems (TVLSI), to appear on 2019 [DOI Article link] [bibTex] [PDF]
- Jean-Claude Bajard and Paulo Sérgio Alves Martins and Leonel Sousa and Vincent Zucca, Improving the Efficiency of SVM Classification with FHE, article in IEEE Transactions on Information Forensics and Security, to appear on 2019 [bibTex]
- Nada Kassem and Liqun Chen and Rachid El Bansarkhani and Ali El Kaafarani and Jan Camenisch and Patrick Hough and Paulo Sérgio Alves Martins and Leonel Sousa, More Efficient, Provably-Secure Direct Anonymous Attestation from Lattices, article in Future Generation Computer Systems, to appear on 2019, Elsevier [Article] [bibTex]
- Belen Gonzalez-Sanchez and Miguel A. Vega-Rodríguez and Sergio Santander-Jiménez, Multi-objective Memetic Meta-heuristic Algorithm for Encoding the Same Protein with Multiple Genes, article in Expert Systems With Applications vol. 136 pp. 83-93, to appear on 2019, Pergamon-Elsevier Science [DOI Article link] [bibTex]
- Belen Gonzalez-Sanchez and Miguel A. Vega-Rodríguez and Sergio Santander-Jiménez, Multi-Objective Protein Encoding: Redefinition of the Problem, New Problem-aware Operators, and Approach based on Variable Neighborhood Search, article in Information Sciences vol. 500 pp. 173-189, to appear on 2019, Elsevier Science [DOI Article link] [bibTex]
- Gustavo Sanchez and Ramon Fernandes and Rodrigo Cataldo and Luciano Agostini and Leonel Sousa and Cesar Marcon, Multicore Parallelism Exploration Targeting 3D-HEVC Intra-Frame Prediction, article in IEEE Design & Test, to appear on 2019 [bibTex]
- Golnaz Taheri and Ahmad Khonsari and Reza Entezari-Maleki and Leonel Sousa, Temperature-aware Core Management in MPSoCs: Modeling and Evaluation using MRMs, article in IET Computers & Digital Techniques, to appear on 2019 [bibTex] [PDF]
- Leonel Sousa and Rogério Paludo and Paulo Sérgio Alves Martins and Hector Pettenghi, Towards the Integration of Reverse Converters into the RNS Channels, article in IEEE Transactions on Computers, to appear on 2019 [bibTex]
- João Filipe Dias Guerreiro and Aleksandar Ilic and Nuno Roma and Pedro Tomás, Modeling and Decoupling the GPU Power Consumption for Cross-Domain DVFS, article in IEEE Transactions on Parallel and Distributed Systems vol. 30 (11) pp. 2494-2506, Nov. 2019, IEEE [DOI Article link] [bibTex] [PDF]
- Rafael Alexandre da Silva Marques and Luís M. S. Russo and Nuno Roma, Flying Tourist Problem: Flight Time and Cost Minimization in Complex Routes, article in Expert Systems with Applications vol. 130 pp. 172 - 187, Sep. 2019, Elsevier [bibTex] [PDF]
- Miguel A. Vega-Rodríguez and Sergio Santander-Jiménez, Parallel Computing in Bioinformatics: A View from High-Performance, Heterogeneous, and Cloud Computing, article in Journal of Supercomputing vol. 75 (7) pp. 3369-3373, Jul. 2019, Springer [DOI Article link] [bibTex]
- Paulo Sérgio Alves Martins and Leonel Sousa, A Methodical FHE-based Cloud Computing Model, article in Future Generation Computer Systems (95) pp. 639-648, Jun. 2019, Elsevier [bibTex] [PDF]
- Nicolas Denoyelle and Brice Goglin and Aleksandar Ilic and Emmanuel Jeannot and Leonel Sousa, Modeling Non-Uniform Memory Access on Large Compute Nodes with the Cache-Aware Roofline Model, article in Transactions on Parallel and Distributed Systems (TPDS) vol. 30 (6) pp. 1374-1389, Jun. 2019, IEEE [bibTex]
- Sergio Santander-Jiménez and Miguel A. Vega-Rodríguez and Leonel Sousa, A Multiobjective Adaptive Approach for the Inference of Evolutionary Relationships in Protein-Based Scenarios, article in Information Sciences vol. 485 (65) pp. 281-300, May. 2019, Elsevier Science [DOI Article link] [bibTex]
- Maurício Breternitz Jr and Vanderson Rosario and Edson Borin, The Multi-Lane Capsule Network (MLCN), article in IEEE Signal Processing Letters, May. 2019 [DOI Article link] [bibTex]
- Sergio Santander-Jiménez and Miguel A. Vega-Rodríguez and Jorge Vicente-Viola and Leonel Sousa, Comparative Assessment of GPGPU Technologies to Accelerate Objective Functions: A Case Study on Parsimony, article in Journal of Parallel and Distributed Computing vol. 126 pp. 67-81, Apr. 2019, Academic Press-Elsevier Science [DOI Article link] [bibTex]
- Satyendra Singh Yadav and Paulo Alexandre Crisóstomo Lopes and Aleksandar Ilic and Sarat Kumar Patra, Hungarian algorithm for subcarrier assignment problem using GPU and CUDA, article in International Journal of Communication Systems, Feb. 2019, Wiley [Article] [DOI Article link] [bibTex]
- Ahmad Hiasat and Leonel Sousa, On the Design of RNS Inter-Modulo Processing Units for the Arithmetic-Friendly Moduli Sets {2^{n+k}, 2^n-1, 2^{n+1}-1}, article in The Computer Journal vol. 62 (2) pp. 292-300, Feb. 2019, Oxford journals [Article] [bibTex]
- Sergio Santander-Jiménez and Miguel A. Vega-Rodríguez, Comparative Analysis of Intra-Algorithm Parallel Multiobjective Evolutionary Algorithms: Taxonomy Implications on Bioinformatics Scenarios, article in IEEE Transactions on Parallel and Distributed Systems vol. 30 (1) pp. 63-78, Jan. 2019, IEEE Computer Society [DOI Article link] [bibTex]
- Belen Gonzalez-Sanchez and Miguel A. Vega-Rodríguez and Sergio Santander-Jiménez and José M. Granado-Criado, Multi-Objective Artificial Bee Colony for Designing Multiple Genes Encoding the Same Protein, article in Applied Soft Computing vol. 74 pp. 90-98, Jan. 2019, Elsevier Science [DOI Article link] [bibTex]

2018

- Sergio Santander-Jiménez and Miguel Vega-Rodriguez and Leonel Sousa, Multiobjective Frog-Leaping Optimization for the Study of Ancestral Relationships in Protein Data, article in IEEE Transactions on Evolutionary Computation vol. 26 (6) pp. 879-893, Dec. 2018, IEEE [DOI Article link] [bibTex]
- Gustavo Sanchez and Luciano Agostini and Leonel Sousa and César Marcon, Parallelism Exploration for 3D High Efficiency Video Coding Depth Modeling Mode One, article in Journal of Real-Time Image Processing, to appear on 2018, Springer [bibTex] [PDF]
- Ahmad Hiasat and Leonel Sousa, Sign Identifier for the Enhanced Three Moduli Set {2^{n+k}, 2^n-1, 2^{n+1}-1}, article in Journal of Signal Processing Systems, to appear on 2018, Springer [Article] [bibTex] [PDF]
- Golnaz Taheri and Ahmak Khonsari and Reza Entezari-Maleki and Mohammad Baharloo and Leonel Sousa, Temperature-aware Dynamic Voltage and Frequency Scaling enabled MPSoC Modeling using Stochastic Activity Networks, article in Microprocessors and Microsystems: Embedded Hardware Design, to appear on 2018, Elsevier [bibTex]
- Diogo Miguel Coroas Prista Caetano and Taimur Rabuske and Jorge Manuel dos Santos Ribeiro Fernandes and M. Pelkner and C. Fermont and S. Freitas and B. Ribez and F. Franco and J. Paul and Moises Simões Piedade and P. Freitas, High-Resolution Non-Destructive Test Probes Based on Magnetoresistive Sensors, article in IEEE Transactions on Industrial Electronics, Nov. 2018, IEEE [DOI Article link] [bibTex]
- Reza Entezari-Maleki and Kishor Trivedi and Leonel Sousa and Ali Movaghar, Performability-based Workflow Scheduling in Grids, article in Computer Journal vol. 61 (10) pp. 1479–1495, Oct. 2018, Oxford Academic [Article] [bibTex]
- Satyendra Singh Yadav and Paulo Alexandre Crisóstomo Lopes and Sarat Kumar Patra, Parallel Resource Allocation and Subcarrier Assignment for Downlink OFDMA, article in IETE Technical Review pp. 1-16, Jul. 2018, Taylor & Francis [Article] [DOI Article link] [bibTex]
- Nuno Neves and Pedro Tomás and Nuno Roma, Stream Data Prefetcher for the GPU Memory Interface, article in Journal of Supercomputing vol. 74 (6) pp. 2314-2328, Jun. 2018, Springer US [DOI Article link] [bibTex] [PDF]
- Biao Wang and Diego Felix de Souza and Mauricio Alvarez-Mesa and Chi Ching Chi and Ben Juurlink and Aleksandar Ilic and Nuno Roma and Leonel Sousa, Highly Parallel HEVC Decoding for Heterogeneous Systems with CPU and GPU, article in Signal Processing: Image Communication vol. 62 pp. 93-105, Mar. 2018, Elsevier [DOI Article link] [bibTex] [PDF]
- Lidia Kuan and Frederico Pratas and Leonel Sousa and Pedro Tomás, MrBayes sMC3: Accelerating Bayesian Inference of Phylogenetic Trees, article in International Journal of High Performance Computing Applications vol. 32 (2) pp. 246-265, Feb. 2018, SAGE [DOI Article link] [bibTex]

International Conferences: 17

2019

- Leila Rashidi and Amir Dalili-Yazdi and Reza Entezari-Maleki and Leonel Sousa and Ali Movaghar, Scalable Performance Analysis of Epidemic Routing Considering Skewed Location Visiting Preferences, presented at 27th IEEE International Symposium on the Modeling, Analysis, and Simulation of Computer and Telecommunication Systems (MASCOTS), Jul. 2019 [bibTex]
- Pedro Pontes Brito de Sá and Helena Aidos and Nuno Roma and Pedro Tomás, Heart Disease Detection Architecture for Lead I Off-the-Person ECG Monitoring Devices, presented at European Signal Processing Conference (EUSIPCO 2019), Jun. 2019 [bibTex]
- João Francisco Cardoso Gante and Gabriel Falcão and Leonel Sousa, Enhancing Beamformed Fingerprint Outdoor Positioning with Hierarchical Convolutional Neural Networks, presented at 2019 International Conference on Acoustics, Speech and Signal Processing, May. 2019 [bibTex]
- Paulo Sérgio Alves Martins and Jérémy Marrez and Jean Claude Bajard and Leonel Sousa, HyPoRes: An Hybrid Representation System for ECC, presented at 26th IEEE Symposium on Computer Arithmetic, Apr. 2019 [bibTex]
- Maurício Breternitz Jr and Felipe Franca and Leandro Santiago and et al, Memory Efficient Weightless Neural Network using Bloom Filter, presented at 27 th European Symposium on Artificial Neural Networks, Computational Intelligence and Machine Learning, Apr. 2019 [bibTex] [PDF]
- Roger Endrigo Carvalho Porto and Luciano Agostini and Bruno Zatt and Nuno Roma and Marcelo Porto, Power-Efficient Approximate SAD Architecture with LOA Imprecise Adders, presented at IEEE Latin American Symposium on Circuits and Systems (LASCAS 2019), Feb. 2019 [bibTex] [PDF]

2018

- Sergio Santander-Jiménez and Miguel A. Vega-Rodríguez and Leonel Sousa, Phylogenetic Reconstructions Using an Indicator-Based Bat Algorithm for Multicore Processors, presented at IEEE International Conference on Bioinformatics and Biomedicine 2018 (IEEE BIBM 2018), Dec. 2018 [bibTex]
- Alexandre Filipe Coelho Vieira and Frederico Pratas and Leonel Sousa and Aleksandar Ilic, Accelerating CNN computation: Quantisation tuning and network resizing, presented at Workshop on AutotuniNg and aDaptivity AppRoaches for Energy Efficient HPC Systems (ANDARE/PACT), Nov. 2018 [DOI Article link] [bibTex]
- Maurício Breternitz Jr and Michael Lebeane and Khaled Hamidouche and Brad Benton and Steven K Reinhardt and Lizy K John, ComP-net: command processor networking for efficient intra-kernel communications on GPUs, presented at PACT '18 Proceedings of the 27th International Conference on Parallel Architectures and Compilation Techniques, Nov. 2018 [DOI Article link] [bibTex] [PDF]
- Sergio Santander-Jiménez and Miguel A. Vega-Rodríguez and Leonel Sousa, Analysis of Scheduling Policies in Metaheuristics for Evolutionary Biology, presented at 6th International Workshop on Parallelism in Bioinformatics (PBio 2018), Sep. 2018 [DOI Article link] [bibTex]
- João Vieira and Paolo Ienne and Nuno Roma and Gabriel Falcao and Pedro Tomás, Exploiting Compute Caches for Memory Bound Vector Operations, presented at International Symposium on Computer Architecture and High Performance Computing (SBAC-PAD'2018), Sep. 2018 [bibTex] [PDF]
- Luís Filipe Azenhas Fiolhais and Horácio C. Neto, An Efficient Exact Fused Dot Product Processor in FPGA, presented at International Conference on Field Programmable Logic and Applications (FPL), Aug. 2018 [DOI Article link] [bibTex]
- Estefania Serrano and Aleksandar Ilic and Leonel Sousa and Javier Garcia Blas and Jesus Carretero, Cache-aware Roofline Model and Medical Imaging Optimization, presented at Workshop on Sustainable Ultrascale Computing Systems - ISC High Performance, Jun. 2018 [bibTex]
- João Carlos Basto de Lima da Palma Santos and Diogo Brito and Jorge Manuel dos Santos Ribeiro Fernandes and Gonçalo Nuno Gomes Tavares, Radio Pulsar Signal Generator, presented at IEEE International Symposium on Circuits and Systems, May. 2018 [bibTex]
- Ricardo Chaves and Lukasz Chmielewski and Francesco Regazzoni and Lejla Batina, SCA-Resistance for AES: How Cheap Can We Go?, presented at International Conference on Cryptology in Africa, May. 2018 [bibTex]
- João Francisco Cardoso Gante and Gabriel Falcão and Leonel Sousa, Data-Aided Fast Beamforming Selection For 5G, presented at IEEE International Conference on Acoustics, Speech and Signal Processing, Apr. 2018 [bibTex]
- João Filipe Dias Guerreiro and Aleksandar Ilic and Nuno Roma and Pedro Tomás, GPGPU Power Modeling for Multi-Domain Voltage-Frequency Scaling, presented at 24th International Symposium on High-Performance Computer Architecture (HPCA'2018), Feb. 2018 [DOI Article link] [bibTex] [PDF]

Dissertations

PhD Theses: 4

2019

- Nuno Neves advised by Nuno Roma and Pedro Tomás, Energy-Efficient Computing: Adaptive Structures and Data Management, PhD Thesis at Instituto Superior Técnico, Universidade de Lisboa, Jan. 2019 [bibTex]

2018

- Diogo Brito advised by Gonçalo Nuno Gomes Tavares and Jorge Manuel dos Santos Ribeiro Fernandes, RF Receiver for Navigation Systems Using Pulsars, PhD Thesis, Dec. 2018 [bibTex]
- Diego Felix de Souza advised by Leonel Sousa and Nuno Roma, GHEVC: An Efficient HEVC Decoder for Graphics Processing Units, PhD Thesis at Universidade de Lisboa, Jul. 2018 [bibTex]
- Tiago Domingues advised by Marcelino Bicho dos Santos and Gonçalo Nuno Gomes Tavares, Click Modulation, PhD Thesis, Jan. 2018 [bibTex]

MSc Theses: 12

2019

- Francisco Sousa Lobo Theriaga Gonçalves advised by Aleksandar Ilic and Leonel Sousa, Boosting the performance of multi-objective epistasis detection, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Jul. 2019 [bibTex]
- Illya Gerasymchuk advised by Ricardo Chaves and Aleksandar Ilic, TLS for IOT, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Jul. 2019 [bibTex]
- Cláudia Fiore advised by Miguel Matos and Ricardo Chaves, Providing trust to multi-cloud storage platforms through the blockchain, MSc Thesis, Feb. 2019 [bibTex]

2018

- João Miguel Morgado Pereira Vieira advised by Pedro Tomás and Nuno Roma, Exploiting Processing Near Cache for Memory Bound Vector Operations, MSc Thesis, Nov. 2018 [bibTex]
- Jorge Guilherme Pessoa dos Santos advised by Pedro Tomás and Helena Aidos, Video Compression Using (End-to-End) Deep Learning, MSc Thesis, Nov. 2018 [bibTex]
- Rui Miguel Seromenho de Almeida Graça advised by Gonçalo Nuno Gomes Tavares, Desenvolvimento de Fresa CNC a laser: Sistema de Controlo Global e Programas de Vetorização, MSc Thesis, Jun. 2018 [bibTex]
- Alexandre Filipe Coelho Vieira advised by Aleksandar Ilic and Leonel Sousa, CNN Architectures on Heterogeneous Systems, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Jun. 2018 [bibTex]
- Daniel Paulo Januario Lopes advised by Gonçalo Nuno Gomes Tavares, Desenvolvimento de Fresa CNC a laser, MSc Thesis, Jun. 2018 [bibTex]
- Rui de Almeida Torroaes Albuquerque advised by Nuno Roma and Pedro Tomás, Energy-Efficient HEVC Motion Estimation for Mobile Heterogeneous Platforms, MSc Thesis at Universidade de Lisboa, Jun. 2018 [bibTex]
- Helder Francisco Pereira Duarte advised by Aleksandar Ilic, Performance Analysis of Intel Gen9.5 Integrated GPU Architecture, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Jun. 2018 [bibTex]
- Fabian Näf advised by Gonçalo Nuno Gomes Tavares, Wireless Adaptive Reconfigurable Network , MSc Thesis, Jun. 2018 [bibTex]
- André Alexandre Rocha Morgado Simões advised by Gonçalo Nuno Gomes Tavares, Wireless Adaptive Reconfigurable Network - Sensors and Energy Harvesting Subsystem, MSc Thesis, Jun. 2018 [bibTex]

as Editors

Edited Proceedings: 1

2018

- Miguel A. Vega-Rodríguez and Sergio Santander-Jiménez and José M. Granado-Criado and Rosa M. Badia , editors, Proceedings of the 6th International Workshop on Parallelism in Bioinformatics (PBio 2018), Sep. 2018, Association for Computing Mach [bibTex]

Special Issues of Journals (editor): 1

2019

- Miguel A. Vega-Rodríguez and Sergio Santander-Jiménez, editors, Special Issue on Parallel Computing in Bioinformatics, Journal of Supercomputing vol. 75 (7), Jul. 2019, Springer [bibTex]