Publications
Filter Publications: 2018 - 2020
Books
Book Chapters: 4
2019
- , A Test Specification Language for Information Systems based on Data Entities, Use Cases and State Machines, chapter of Model-Driven Engineering and Software Development, Jan. 2019, Springer [bibTex]
2018
- , Evaluation of XIS-Reverse, a Model-Driven Reverse Engineering Approach for Legacy Information Systems, chapter of Model-Driven Engineering and Software Development, Jul. 2018, Springer [bibTex]
- , Informed Decision-Making with Enterprise Dynamic Systems Control, Systems and Software Engineering, chapter of Encyclopedia of Information Science and Technology, Jan. 2018, IGI Global [bibTex]
- , Challenges of Meta Access Control Model Enforcement to an Increased Interoperability, chapter of Encyclopedia of Information Science and Technology, fourth edition, Systems and Software Engineering, Jan. 2018, IGI Global [bibTex]
Articles
International Journal Articles: 21
2019
- , Programming languages for data-Intensive HPC applications: A systematic mapping study, article in Parallel Computing, to appear on 2019, Elsevier [DOI Article link] [bibTex]
- , Flying Tourist Problem: Flight Time and Cost Minimization in Complex Routes, article in Expert Systems with Applications vol. 130 pp. 172 - 187, Sep. 2019, Elsevier [bibTex] [PDF]
- , On-demand big data integration, article in Distributed and Parallel Databases vol. 37 (2) pp. 273–295, Jun. 2019, Springer [DOI Article link] [bibTex]
- , Twiner: correlation-based regularization for identifying common cancer gene signatures, article in BMC Bioinformatics vol. 20 (356), Jun. 2019 [Article] [DOI Article link] [bibTex] [PDF]
- , OpinionLink: Leveraging user opinions for product catalog enrichment, article in Information Processing & Management vol. 56 (3) pp. 823–843, May. 2019 [bibTex]
- , RSL- IL4Privacy: a domain-specific language for the rigorous specification of privacy policies, article in Requirements Engineering vol. 24 (1) pp. 1--26, May. 2019 [bibTex]
- , Combining similarity features and deep representation learning for stance detection in the context of checking fake news, article in ACM Journal of Data and Information Quality vol. 9 (39), Apr. 2019 [bibTex]
- , RSL-IL4Privacy: A Domain-Specific Language for the Specification of Privacy-Aware Requirements, article in Requirements Engineering vol. 24 (1), Jan. 2019, Springer [DOI Article link] [bibTex]
2018
- , Forensic Analysis of Communication Records of Messaging Applications from Physical Memory, article in Computers & Security, to appear on 2018, Elsevier [DOI Article link] [bibTex]
- , SpliceTAPyR - An Efficient Method For Transcriptome Alignment, article in International Journal of Foundations of Computer Science vol. 29 (8) pp. 1297-1310, Dec. 2018, World Scientific Publishing Co [Article] [DOI Article link] [bibTex] [PDF]
- , Forensic Analysis of Communication Records of Web-based Messaging Applications from Physical Memory, article in Computer & Security, Oct. 2018, Elsevier [bibTex]
- , Estimating attractor reachability in asynchronous logical models, article in Frontiers in Physiology vol. 9 pp. 1161, Jul. 2018 [DOI Article link] [bibTex]
- , Triclustering Algorithms for Three-Dimensional Data Analysis: A Comprehensive Survey, article in ACM Computing Surveys (CSUR) vol. 51 pp. 1-43, Jun. 2018 [DOI Article link] [bibTex]
- , Can HVAC really learn from users? A simulation-based study on the effectiveness of voting for comfort and energy use optimisation, article in Sustainable Cities and Society, May. 2018, Elsevier [Article] [DOI Article link] [bibTex] [PDF]
- , Large-Scale Simulations of Bacterial Populations over Complex Networks, article in Journal of Computational Biology, May. 2018 [bibTex]
- , Deep neural models for ICD-10 coding of death certificates and autopsy reports in free-text, article in Journal of Biomedical Informatics vol. 80 pp. 64-77, Apr. 2018, Elsevier [Article] [DOI Article link] [bibTex]
- , Linking and Cutting Spanning Trees, article in Algorithms vol. 11 (4) pp. 53, Apr. 2018, MDPI [DOI Article link] [bibTex]
- , Using Machine Learning to Improve the Prediction of Functional Outcome in Ischemic Stroke Patients, article in ACM/IEEE Transactions cn Computational Biology and Bioinformatics vol. 15 (6) pp. 1953-1959, Mar. 2018 [DOI Article link] [bibTex] [PDF]
- , Fast phylogenetic inference from typing data, article in Algorithms for Molecular Biology vol. 13 (4), Feb. 2018, BioMed Central [DOI Article link] [bibTex]
- , Usability Evaluation of the Domain Specific Language for Spatial Simulation Scenarios, article in Cogent Engineering vol. 5 (1), Feb. 2018, Cogent [DOI Article link] [bibTex]
- , Using Markov Theory to Deliver Informed Decisions in Partially Observable Business Processes Operation, article in International Journal of Operations Research and Information Systems (IJORIS) vol. 9 (2) pp. 53--72, Jan. 2018, IGI Global [DOI Article link] [bibTex]
International Conferences: 28
2019
- , Semantic Frame Induction as a Community Detection Problem, presented at Complex Networks 2019, Dec. 2019 [DOI Article link] [bibTex]
- , Narrative Planning Model Acquisition from Text Summaries and Descriptions, presented at AAAI Conference on Artificial Intelligence (AAAI-20), Nov. 2019 [bibTex] [PDF]
- , A Model-Driven Approach for Developing Responsive Web Apps, presented at ENASE’2019, May. 2019 [bibTex]
- , Demystifying the Combination of Dynamic Slicing and Spectrum-based Fault Localization, presented at 28th International Joint Conference on Artificial Intelligence (IJCAI19), May. 2019 [bibTex] [PDF]
- , From Requirements to Automated Acceptance Tests of Interactive Apps: An Integrated Model-based Testing Approach, presented at ENASE’2019, May. 2019 [bibTex]
- , LegalLanguage: a Domain-Specific Language for Legal Contexts and its Application in Production Processes, presented at EEWC’2019, May. 2019 [bibTex]
- , On the Discovery of Educational Patterns using Biclustering, presented at 15th International Conference on Intelligent Tutoring Systems (ITS), May. 2019 [bibTex]
- , On the Discovery of Educational Patterns using Biclustering, presented at 15th International Conference on Intelligent Tutoring Systems (ITS), May. 2019 [bibTex]
- , The importance of canonical product attributes on user opinions: an empirical investigation, presented at 10th Latin American Web Congress (LA-WEB 2019), May. 2019 [bibTex]
2018
- , Adaptive Execution of Continuous and Data-intensive Workflows with Machine Learning, presented at Middleware, Dec. 2018 [bibTex]
- , Conditional Random Fields as Recurrent Neural Networks for 3D Medical Imaging Segmentation, presented at Medical Imaging meets NeurIPS Workshop, Dec. 2018 [bibTex] [PDF]
- , FTR-18: Collecting rumours on football transfer news, presented at 2nd International Workshop on Rumours and Deception in Social Media (RDSM), Nov. 2018 [bibTex] [PDF]
- , A Collaborative Platform for Better Managing Technical Documentation: An analysis from a Requirements Engineering Perspective, presented at QUATIC’2018, Sep. 2018 [bibTex]
- , FPGA-based OpenCL Accelerator for Discovering Temporal Patterns in Gene Expression Data Using Biclustering', presented at PBio 2018 Proceedings of the 6th International Workshop on Parallelism in Bioinformatics , Sep. 2018 [DOI Article link] [bibTex]
- , ConnectionLens: Finding Connections Across Heterogeneous Data Sources (demo), presented at International Conference on Very Large Databases (VLDB), Aug. 2018 [bibTex]
- , Towards a Catalogue of Reusable Security Requirements, Risks and Vulnerabilities, presented at International Conference on Information Systems Development (ISD'2018), Aug. 2018 [bibTex]
- , A Catalogue of Reusable Security Concerns: Focus on Privacy Threats, presented at IEEE Conference on Business Informatics'2018, Jul. 2018 [bibTex]
- , Using Fuzzy Fingerprints for Cyberbullying Detection in Social Networks, presented at 2018 IEEE International Conference on Fuzzy Systems (FUZZ-IEEE), Jul. 2018 [bibTex] [PDF]
- , A Viewpoint for Representing Costs in Enterprise Architectures, presented at 20th IEEE Conference on Business Informatics, Jun. 2018 [bibTex]
- , Availability of cultural heritage structured metadata in the world wide web, presented at 22nd International Conference on Electronic Publishing, Jun. 2018 [bibTex]
- , Conceptualizing DEMO business transactions with Blockchain Hyperledger Composer to enable Traceability and Control, presented at EEWC, Jun. 2018 [bibTex]
- , Order-preserving Pattern Matching Indeterminate Strings, presented at Symposium on Combinatorial Pattern Matching (CPM), Jun. 2018 [bibTex]
- , Record linkage methods for administrative data: The portuguese census transformation program, presented at 2018 European Conference on Quality in Official Statistics, Jun. 2018 [bibTex]
- , Tag-Based User Fuzzy Fingerprints for Recommender Systems, presented at IPMU2018 - 17th International Conference on Information Processing and Management of Uncertainty in Knowledge-Based Systems, Jun. 2018 [bibTex] [PDF]
- , LeanBench: comparing software stacks for batch and query processing of IoT data, presented at International Conference on Ambient Systems, Networks and Technologies (ANT), May. 2018 [bibTex]
- , Semiautomated Approach to the Specification and Resolution of Variability in Textual Requirements, presented at ICEIS'2018, Apr. 2018 [bibTex]
- , Specification of Personal Data Protection Requirements: Interpretation of Legal Requirements from the GDPR, presented at ICEIS'2018, Apr. 2018 [bibTex]
- , Towards a Test Specification Language for Information Systems: Focus on Data Entity and State Machine Tests, presented at MODELSWARD’2018, Feb. 2018 [bibTex]
National Conferences: 2
2018
- , A Heterogeneidade na Representação da Informação Musical : Proposta de uma Ontologia para a Música, presented at 13º Congresso BAD, Oct. 2018 [bibTex]
- , Revisão Sistemática da Literatura sobre Ontologias Legais, presented at Conferência da Associação Portuguesa de Sistemas de Informação (CAPSI'2018), Sep. 2018 [bibTex]
Dissertations
PhD Theses: 3
2018
- advised by Ana T. Freitas and Lucymara Agnez-Lima, Prospecção de genes aplicados à biodegradação de hidrocarbonetos e produção de surfactantes utilizando abordagens computacionais, PhD Thesis at Universidade Federal do Rio Grande do Norte - Brasil, Apr. 2018 [bibTex]
- advised by Mário J. Silva and Paula Carvalho, Agile Social Media Analysis with Neural Networks, PhD Thesis at IST, Jan. 2018 [bibTex] [PDF]
MSc Theses: 18
2019
- advised by H. Sofia Pinto and L. Miguel Silveira, Sculpture Inspired Musical Composition - One Possible Approach, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Nov. 2019 [bibTex]
- advised by H. Sofia Pinto and David Martins de Matos, Automatically Generating Novel and Epic Music Tracks; Exploring Computational Creativity using Deep Structures against Music, MSc Thesis, Jun. 2019 [bibTex]
- advised by Bruno Martins and David Martins de Matos, Interpretable Deep Learning Methods for Classifying Folktales According to the Aarne-Thompson-Uther Scheme, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Jun. 2019 [bibTex]
2018
- advised by Pável Calado, Census Optimization Using Machine Learning Techniques, MSc Thesis, Dec. 2018 [bibTex]
- advised by Helena Galhardas and João Carlos Serrenho Dias Pereira, Physician-friendly predictive model: application to vasopressors administration and mechanical ventilation prediction, MSc Thesis at Instituto Superior Técnico, Univ. de Lisboa, Dec. 2018 [bibTex]
- advised by Pável Calado, “Big data meets nature conservation”: Ferramentas automáticas para extracção de informação relevante para a conservação da biodiversidade, MSc Thesis, Dec. 2018 [bibTex]
- advised by Helena Galhardas and Inês Lynce, DeepSea: Web-based database, MSc Thesis at Instituto Superior Técnico, Univ. de Lisboa, Nov. 2018 [bibTex]
- advised by Pável Calado and Mário J. Silva, Census Optimization Using Machine Learning Techniques, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Oct. 2018 [bibTex]
- advised by Mário J. Silva and Francisca Leite, Conformance Checking for Care Pathway Compliance Assessment, MSc Thesis, Oct. 2018 [bibTex]
- advised by H. Sofia Pinto and Francisco S. Melo, Creating Recipes using Machine Learning and Computational Creativity , MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Oct. 2018 [bibTex]
- advised by Bruno Martins and Mário J. Silva, Deep Learning for Multi-Label ICD-10 Classification of Hospital Discharge Summaries, MSc Thesis, Oct. 2018 [bibTex]
- advised by Bruno Martins and Mário J. Silva, Predicting Restaurant Inspection Scores Based on Yelp Data and Sanitary Inspection Reports, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Oct. 2018 [bibTex]
- advised by Alberto Rodrigues da Silva, Rigorous Project Plans with the ITLingo PSL Excel Template, MSc Thesis at IST, Oct. 2018 [bibTex]
- advised by Alberto Rodrigues da Silva, RSLingo4Cybersecurity: Rigorous and Reusable Requirements Catalogue in Cybersecurity Domain, MSc Thesis at IST, Oct. 2018 [bibTex]
- advised by Alberto Rodrigues da Silva, Catálogo de Requisitos de Segurança Alinhados com o Regulamento Geral de Proteção de Dados Pessoais (UE) 2016/679, MSc Thesis at IST, Jun. 2018 [bibTex]
- advised by Mário J. Silva and Bruno Martins, EpiMass: A Clinical and Epidemiological Platform for Mass Gatherings, MSc Thesis, Jun. 2018 [bibTex]
- advised by Helena Galhardas and João Carlos Serrenho Dias Pereira, Sistema de Gestão de Informação do IPFN: Gestão de Recursos Humanos e Suporte Informático, MSc Thesis at Instituto Superior Técnico, Univ. de Lisboa, Apr. 2018 [bibTex]
Internships: 1
2018
as Editors
Edited Proceedings: 2
2019
- , editors, Advances in Database Technology - 22nd International Conference on Extending Database Technology (EDBT 2019), Mar. 2019, OpenProceedings.org [bibTex]
2018
- , editors, Enterprise, Business-Process and Information Systems Modeling, LNBIP 318, Jun. 2018, Springer Verlag [bibTex]
Reports
Technical Reports: 4
2019
- , Technical usability of Wikidata’s linked data Evaluation of machine interoperability and data interpretability, INESC-ID Tec. Rep. 2/2019, Apr. 2019 [bibTex] [PDF]
2018
- , A robust hierarchical nominal classification method based on similarity and dissimilarity, INESC-ID Tec. Rep. 5/2018, Nov. 2018 [bibTex] [PDF]
- , On-Demand Big Data Integration: A Hybrid ETL Approach for Reproducible Scientific Research, INESC-ID Tec. Rep. 3/2018, Apr. 2018 [bibTex]
- , Evaluation of Schema.org for Aggregation of Cultural Heritage Metadata, INESC-ID Tec. Rep. 1/2018, Jan. 2018 [bibTex] [PDF]